Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
StrcQ8VIM6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
StrcQ8VIM6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
StrcQ8VIM6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.41■□□□□ 0.7
StrcQ8VIM6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Gm15358-201ENSMUST00000119249 520 ntBASIC19.4■□□□□ 0.7
StrcQ8VIM6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.4■□□□□ 0.7
StrcQ8VIM6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
StrcQ8VIM6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
StrcQ8VIM6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
StrcQ8VIM6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Gm18489-201ENSMUST00000172565 551 ntBASIC19.39■□□□□ 0.69
StrcQ8VIM6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.39■□□□□ 0.69
StrcQ8VIM6 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.39■□□□□ 0.69
StrcQ8VIM6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
StrcQ8VIM6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Gm27301-201ENSMUST00000184012 127 ntBASIC19.38■□□□□ 0.69
StrcQ8VIM6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Gm20553-201ENSMUST00000204205 844 ntBASIC19.38■□□□□ 0.69
StrcQ8VIM6 Thap2-203ENSMUST00000218989 527 ntBASIC19.38■□□□□ 0.69
StrcQ8VIM6 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.38■□□□□ 0.69
StrcQ8VIM6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
StrcQ8VIM6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
StrcQ8VIM6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.37■□□□□ 0.69
StrcQ8VIM6 Gm18246-201ENSMUST00000221023 728 ntBASIC19.37■□□□□ 0.69
StrcQ8VIM6 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.37■□□□□ 0.69
StrcQ8VIM6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
StrcQ8VIM6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
StrcQ8VIM6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.36■□□□□ 0.69
StrcQ8VIM6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.36■□□□□ 0.69
StrcQ8VIM6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Rprl2-201ENSMUST00000157150 290 ntBASIC19.36■□□□□ 0.69
StrcQ8VIM6 Rpph1-201ENSMUST00000175096 319 ntBASIC19.36■□□□□ 0.69
StrcQ8VIM6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms