Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Mir5130-201ENSMUST00000175160 84 ntBASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Gm7889-201ENSMUST00000185591 958 ntBASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H1fooQ8VIK3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H1fooQ8VIK3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm43799-201ENSMUST00000201845 579 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm18959-201ENSMUST00000208954 655 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Gm10566-201ENSMUST00000086739 996 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H1fooQ8VIK3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms