Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.91■□□□□ 0.3
Trim60Q8VI40 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.91■□□□□ 0.3
Trim60Q8VI40 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Gm11539-201ENSMUST00000119837 557 ntBASIC16.9■□□□□ 0.3
Trim60Q8VI40 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim60Q8VI40 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim60Q8VI40 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim60Q8VI40 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Trim60Q8VI40 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.89■□□□□ 0.3
Trim60Q8VI40 Phf7-203ENSMUST00000226565 1971 ntBASIC16.89■□□□□ 0.3
Trim60Q8VI40 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim60Q8VI40 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim60Q8VI40 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim60Q8VI40 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.89■□□□□ 0.29
Trim60Q8VI40 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim60Q8VI40 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim60Q8VI40 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Mir5122-201ENSMUST00000175004 89 ntBASIC16.88■□□□□ 0.29
Trim60Q8VI40 Gm22240-201ENSMUST00000175225 82 ntBASIC16.88■□□□□ 0.29
Trim60Q8VI40 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.88■□□□□ 0.29
Trim60Q8VI40 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim60Q8VI40 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.88■□□□□ 0.29
Trim60Q8VI40 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim60Q8VI40 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim60Q8VI40 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms