Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40cQ8VHQ4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Prob1-201ENSMUST00000097619 3021 ntBASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40cQ8VHQ4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab40cQ8VHQ4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Gm11249-201ENSMUST00000117071 859 ntBASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Gm37292-201ENSMUST00000192062 758 ntBASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab40cQ8VHQ4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms