Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdhr1Q8VHP6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdhr1Q8VHP6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr1Q8VHP6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr1Q8VHP6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Cdhr1Q8VHP6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr1Q8VHP6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr1Q8VHP6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr1Q8VHP6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr1Q8VHP6 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.88■□□□□ 0.13
Cdhr1Q8VHP6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms