Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.37■□□□□ 0.21
Vps39Q8R5L3 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.37■□□□□ 0.21
Vps39Q8R5L3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps39Q8R5L3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Gm44450-201ENSMUST00000199528 114 ntBASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps39Q8R5L3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Vps39Q8R5L3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps39Q8R5L3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps39Q8R5L3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Vps39Q8R5L3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Vps39Q8R5L3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms