Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3kbp1Q8R550 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Gm24589-201ENSMUST00000116692 94 ntBASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Gm11336-201ENSMUST00000118168 334 ntBASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Gm18115-201ENSMUST00000221209 621 ntBASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3kbp1Q8R550 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3kbp1Q8R550 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3kbp1Q8R550 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms