Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Top1mtQ8R4U6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.55■□□□□ 0.72
Top1mtQ8R4U6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.54■□□□□ 0.72
Top1mtQ8R4U6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Mir770-201ENSMUST00000103252 94 ntBASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Top1mtQ8R4U6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Gm9013-201ENSMUST00000132939 882 ntBASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Top1mtQ8R4U6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Top1mtQ8R4U6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Top1mtQ8R4U6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Top1mtQ8R4U6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Top1mtQ8R4U6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Top1mtQ8R4U6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Top1mtQ8R4U6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Top1mtQ8R4U6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Top1mtQ8R4U6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms