Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC23.06■■□□□ 1.28
Cd109Q8R422 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC23.06■■□□□ 1.28
Cd109Q8R422 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC23.06■■□□□ 1.28
Cd109Q8R422 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC23.06■■□□□ 1.28
Cd109Q8R422 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Cd109Q8R422 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC23.05■■□□□ 1.28
Cd109Q8R422 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Cd109Q8R422 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Cd109Q8R422 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Cd109Q8R422 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Cd109Q8R422 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cd109Q8R422 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Gm11764-201ENSMUST00000120221 623 ntBASIC23.04■■□□□ 1.28
Cd109Q8R422 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Gm27702-201ENSMUST00000184512 56 ntBASIC23.04■■□□□ 1.28
Cd109Q8R422 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Dapk1-207ENSMUST00000226059 5009 ntBASIC23.04■■□□□ 1.28
Cd109Q8R422 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC23.04■■□□□ 1.28
Cd109Q8R422 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cd109Q8R422 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm4609-201ENSMUST00000106443 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm5138-201ENSMUST00000113842 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm15191-201ENSMUST00000117933 1000 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm12182-201ENSMUST00000118655 1008 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm13882-201ENSMUST00000120886 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm10284-201ENSMUST00000145057 1005 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm10481-201ENSMUST00000179228 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm2574-201ENSMUST00000181051 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm3200-201ENSMUST00000181493 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm8825-201ENSMUST00000182565 998 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm4518-201ENSMUST00000182638 718 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm8330-201ENSMUST00000182754 1008 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm4575-201ENSMUST00000182991 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm8709-201ENSMUST00000183230 1012 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm10293-201ENSMUST00000076317 1002 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Gm6316-201ENSMUST00000082064 1020 ntBASIC23.03■■□□□ 1.28
Cd109Q8R422 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cd109Q8R422 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cd109Q8R422 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.03■■□□□ 1.28
Cd109Q8R422 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cd109Q8R422 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.03■■□□□ 1.28
Cd109Q8R422 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Cd109Q8R422 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Cd109Q8R422 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Gm10175-201ENSMUST00000086013 645 ntBASIC23.02■■□□□ 1.28
Cd109Q8R422 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Cd109Q8R422 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Cd109Q8R422 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cd109Q8R422 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC23.02■■□□□ 1.27
Cd109Q8R422 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cd109Q8R422 Gm2213-201ENSMUST00000197485 688 ntBASIC23.01■■□□□ 1.27
Cd109Q8R422 CT943659.1-201ENSMUST00000215459 326 ntBASIC23.01■■□□□ 1.27
Cd109Q8R422 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Cd109Q8R422 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms