Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf7Q8R0S1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf7Q8R0S1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atf7Q8R0S1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf7Q8R0S1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf7Q8R0S1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf7Q8R0S1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Gm9013-201ENSMUST00000132939 882 ntBASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf7Q8R0S1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atf7Q8R0S1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Atf7Q8R0S1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atf7Q8R0S1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Mir770-201ENSMUST00000103252 94 ntBASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms