Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sf3a1Q8K4Z5 Haglr-201ENSMUST00000100000 2085 ntBASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Gm15794-201ENSMUST00000120182 631 ntBASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Gm7284-201ENSMUST00000131667 944 ntBASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sf3a1Q8K4Z5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
Sf3a1Q8K4Z5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Gm36967-201ENSMUST00000193814 266 ntBASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Sf3a1Q8K4Z5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3a1Q8K4Z5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3a1Q8K4Z5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Olfr129-201ENSMUST00000122318 993 ntBASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms