Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clrn1Q8K445 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clrn1Q8K445 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Gm9013-201ENSMUST00000132939 882 ntBASIC15.4■□□□□ 0.06
Clrn1Q8K445 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.4■□□□□ 0.06
Clrn1Q8K445 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clrn1Q8K445 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.39■□□□□ 0.05
Clrn1Q8K445 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Gm23634-201ENSMUST00000175071 91 ntBASIC15.39■□□□□ 0.05
Clrn1Q8K445 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.39■□□□□ 0.05
Clrn1Q8K445 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms