Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shtn1Q8K2Q9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shtn1Q8K2Q9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shtn1Q8K2Q9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shtn1Q8K2Q9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Gm26308-201ENSMUST00000157768 69 ntBASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shtn1Q8K2Q9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms