Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Depdc1aQ8CIG0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1aQ8CIG0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1aQ8CIG0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1aQ8CIG0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1aQ8CIG0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.33■□□□□ 0.53
Depdc1aQ8CIG0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Depdc1aQ8CIG0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Gm44771-201ENSMUST00000206975 626 ntBASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Gm6376-201ENSMUST00000209407 580 ntBASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Depdc1aQ8CIG0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Gm7862-201ENSMUST00000121461 292 ntBASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Depdc1aQ8CIG0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Gm4459-201ENSMUST00000118750 468 ntBASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Gm12497-201ENSMUST00000138778 237 ntBASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.31■□□□□ 0.52
Depdc1aQ8CIG0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms