Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm11950-201ENSMUST00000121615 838 ntBASIC16.67■□□□□ 0.26
CopaQ8CIE6 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.67■□□□□ 0.26
CopaQ8CIE6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Gm37722-201ENSMUST00000193757 208 ntBASIC16.67■□□□□ 0.26
CopaQ8CIE6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CopaQ8CIE6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.66■□□□□ 0.26
CopaQ8CIE6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CopaQ8CIE6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopaQ8CIE6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CopaQ8CIE6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.64■□□□□ 0.25
CopaQ8CIE6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
CopaQ8CIE6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.64■□□□□ 0.25
CopaQ8CIE6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.64■□□□□ 0.25
CopaQ8CIE6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.63■□□□□ 0.25
CopaQ8CIE6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Mir770-201ENSMUST00000103252 94 ntBASIC16.63■□□□□ 0.25
CopaQ8CIE6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CopaQ8CIE6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CopaQ8CIE6 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms