Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44357-201ENSMUST00000195897 142 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm19658-201ENSMUST00000196231 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44367-201ENSMUST00000196836 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44350-201ENSMUST00000197197 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44390-201ENSMUST00000197533 144 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44313-201ENSMUST00000198018 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44486-201ENSMUST00000198508 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44314-201ENSMUST00000199263 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44394-201ENSMUST00000199558 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44484-201ENSMUST00000199873 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44466-201ENSMUST00000200264 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Gm44359-201ENSMUST00000200671 138 ntBASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rab11fip3Q8CHD8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip3Q8CHD8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Gm6443-201ENSMUST00000203599 874 ntBASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip3Q8CHD8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Gm7506-201ENSMUST00000207758 815 ntBASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip3Q8CHD8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Gm8655-201ENSMUST00000221159 852 ntBASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rab11fip3Q8CHD8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Gm4535-201ENSMUST00000182274 558 ntBASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Gm10355-201ENSMUST00000097146 517 ntBASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab11fip3Q8CHD8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
Rab11fip3Q8CHD8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab11fip3Q8CHD8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rab11fip3Q8CHD8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms