Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh1Q8CGV4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh1Q8CGV4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh1Q8CGV4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh1Q8CGV4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh1Q8CGV4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rdh1Q8CGV4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rdh1Q8CGV4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.83■□□□□ 0.13
Rdh1Q8CGV4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rdh1Q8CGV4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rdh1Q8CGV4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Gm11452-201ENSMUST00000122376 690 ntBASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rdh1Q8CGV4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rdh1Q8CGV4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gm25745-201ENSMUST00000174945 133 ntBASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh1Q8CGV4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh1Q8CGV4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms