Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc4Q8CG47 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
Smc4Q8CG47 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.08■□□□□ 0.8
Smc4Q8CG47 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc4Q8CG47 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc4Q8CG47 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smc4Q8CG47 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smc4Q8CG47 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.06■□□□□ 0.8
Smc4Q8CG47 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.06■□□□□ 0.8
Smc4Q8CG47 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc4Q8CG47 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc4Q8CG47 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc4Q8CG47 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.04■□□□□ 0.8
Smc4Q8CG47 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.04■□□□□ 0.8
Smc4Q8CG47 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.04■□□□□ 0.8
Smc4Q8CG47 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc4Q8CG47 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Mzt1-203ENSMUST00000227948 952 ntBASIC20.03■□□□□ 0.8
Smc4Q8CG47 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms