Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcpip1Q8CDG3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vcpip1Q8CDG3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vcpip1Q8CDG3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.53■□□□□ 0.4
Vcpip1Q8CDG3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcpip1Q8CDG3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms