Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf31Q8CCF0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.83■□□□□ 0.45
Prpf31Q8CCF0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Prpf31Q8CCF0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf31Q8CCF0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Gm36967-201ENSMUST00000193814 266 ntBASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf31Q8CCF0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf31Q8CCF0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf31Q8CCF0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Gm27459-201ENSMUST00000184860 107 ntBASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Gm44454-201ENSMUST00000198541 138 ntBASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf31Q8CCF0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms