Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Gm12085-201ENSMUST00000119263 940 ntBASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd4Q8CC84 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Gm37856-201ENSMUST00000191634 999 ntBASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Lysmd4Q8CC84 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd4Q8CC84 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lysmd4Q8CC84 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms