Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.69■□□□□ 0.42
4933409G03RikQ8C5U0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
4933409G03RikQ8C5U0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Gm12497-201ENSMUST00000138778 237 ntBASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933409G03RikQ8C5U0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Gm4535-201ENSMUST00000182274 558 ntBASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Gm18206-201ENSMUST00000207027 926 ntBASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Gm9172-201ENSMUST00000212092 954 ntBASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Gm10355-201ENSMUST00000097146 517 ntBASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933409G03RikQ8C5U0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.65■□□□□ 0.42
4933409G03RikQ8C5U0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
4933409G03RikQ8C5U0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
4933409G03RikQ8C5U0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms