Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Gm44430-201ENSMUST00000203376 995 ntBASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Olfr129-201ENSMUST00000122318 993 ntBASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc60Q8C4J0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.83■□□□□ 0.92
Ccdc60Q8C4J0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc60Q8C4J0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc60Q8C4J0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc60Q8C4J0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc60Q8C4J0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc60Q8C4J0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gm27742-201ENSMUST00000184667 60 ntBASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc60Q8C4J0 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc60Q8C4J0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms