Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Gm6089-201ENSMUST00000197666 938 ntBASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptcd1Q8C2E4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Gm14140-201ENSMUST00000119999 995 ntBASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Gm7506-201ENSMUST00000207758 815 ntBASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptcd1Q8C2E4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ptcd1Q8C2E4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Gm9727-201ENSMUST00000161387 555 ntBASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 AV026068-213ENSMUST00000223675 1171 ntBASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptcd1Q8C2E4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptcd1Q8C2E4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptcd1Q8C2E4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms