Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Smim4Q8C1Q6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim4Q8C1Q6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Mir5122-201ENSMUST00000175004 89 ntBASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Gm22240-201ENSMUST00000175225 82 ntBASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim4Q8C1Q6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim4Q8C1Q6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Gm13186-201ENSMUST00000118031 316 ntBASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim4Q8C1Q6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim4Q8C1Q6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms