Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Gm7638-201ENSMUST00000121348 967 ntBASIC15.32■□□□□ 0.04
Vps9d1Q8C190 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps9d1Q8C190 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Gm18958-201ENSMUST00000174258 762 ntBASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Gm7977-201ENSMUST00000193787 748 ntBASIC15.31■□□□□ 0.04
Vps9d1Q8C190 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps9d1Q8C190 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.31■□□□□ 0.04
Vps9d1Q8C190 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms