Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx17Q8BVL3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx17Q8BVL3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Gm5186-201ENSMUST00000218781 920 ntBASIC18.08■□□□□ 0.48
Snx17Q8BVL3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx17Q8BVL3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Gm11764-201ENSMUST00000120221 623 ntBASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.07■□□□□ 0.48
Snx17Q8BVL3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx17Q8BVL3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.06■□□□□ 0.48
Snx17Q8BVL3 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx17Q8BVL3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.04■□□□□ 0.48
Snx17Q8BVL3 Gm11025-201ENSMUST00000140773 466 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms