Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Rarb-207ENSMUST00000225921 2756 ntBASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rd3Q8BRE0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.29■□□□□ 0.36
Rd3Q8BRE0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rd3Q8BRE0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rd3Q8BRE0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Gm1401-201ENSMUST00000122048 772 ntBASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rd3Q8BRE0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rd3Q8BRE0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rd3Q8BRE0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.27■□□□□ 0.35
Rd3Q8BRE0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms