Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VmacQ8BP01 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VmacQ8BP01 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VmacQ8BP01 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VmacQ8BP01 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VmacQ8BP01 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VmacQ8BP01 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.79■□□□□ 0.6
VmacQ8BP01 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.79■□□□□ 0.6
VmacQ8BP01 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VmacQ8BP01 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VmacQ8BP01 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VmacQ8BP01 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VmacQ8BP01 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VmacQ8BP01 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VmacQ8BP01 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.78■□□□□ 0.6
VmacQ8BP01 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VmacQ8BP01 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Gm27742-201ENSMUST00000184667 60 ntBASIC18.78■□□□□ 0.6
VmacQ8BP01 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VmacQ8BP01 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
VmacQ8BP01 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Gm13312-201ENSMUST00000119631 718 ntBASIC18.77■□□□□ 0.6
VmacQ8BP01 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VmacQ8BP01 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.77■□□□□ 0.6
VmacQ8BP01 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VmacQ8BP01 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VmacQ8BP01 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VmacQ8BP01 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VmacQ8BP01 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VmacQ8BP01 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VmacQ8BP01 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VmacQ8BP01 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.77■□□□□ 0.59
VmacQ8BP01 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VmacQ8BP01 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VmacQ8BP01 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VmacQ8BP01 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.76■□□□□ 0.59
VmacQ8BP01 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
VmacQ8BP01 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.76■□□□□ 0.59
VmacQ8BP01 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VmacQ8BP01 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VmacQ8BP01 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VmacQ8BP01 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VmacQ8BP01 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VmacQ8BP01 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VmacQ8BP01 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms