Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpidrQ8BGX7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Gm18622-201ENSMUST00000219361 595 ntBASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
SpidrQ8BGX7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Gm27646-201ENSMUST00000183989 110 ntBASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Gm43575-201ENSMUST00000196420 516 ntBASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Gm44487-201ENSMUST00000205145 325 ntBASIC18.94■□□□□ 0.62
SpidrQ8BGX7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpidrQ8BGX7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SpidrQ8BGX7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Gm6736-201ENSMUST00000166583 948 ntBASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SpidrQ8BGX7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms