Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trnp1Q80ZI1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trnp1Q80ZI1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trnp1Q80ZI1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trnp1Q80ZI1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trnp1Q80ZI1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trnp1Q80ZI1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trnp1Q80ZI1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trnp1Q80ZI1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trnp1Q80ZI1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Gm44492-201ENSMUST00000197012 141 ntBASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trnp1Q80ZI1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Mir1895-201ENSMUST00000122615 79 ntBASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Gm27494-201ENSMUST00000184735 189 ntBASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms