Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Trim62Q80V85 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim62Q80V85 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim62Q80V85 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim62Q80V85 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Trim62Q80V85 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim62Q80V85 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Trim62Q80V85 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Mir3081-201ENSMUST00000175305 84 ntBASIC16.88■□□□□ 0.29
Trim62Q80V85 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Gm17807-201ENSMUST00000186869 298 ntBASIC16.88■□□□□ 0.29
Trim62Q80V85 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim62Q80V85 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim62Q80V85 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Haglr-201ENSMUST00000100000 2085 ntBASIC16.87■□□□□ 0.29
Trim62Q80V85 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim62Q80V85 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trim62Q80V85 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.87■□□□□ 0.29
Trim62Q80V85 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim62Q80V85 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.87■□□□□ 0.29
Trim62Q80V85 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.87■□□□□ 0.29
Trim62Q80V85 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim62Q80V85 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim62Q80V85 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim62Q80V85 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim62Q80V85 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.86■□□□□ 0.29
Trim62Q80V85 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Olfr129-201ENSMUST00000122318 993 ntBASIC16.86■□□□□ 0.29
Trim62Q80V85 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim62Q80V85 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim62Q80V85 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim62Q80V85 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim62Q80V85 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.85■□□□□ 0.29
Trim62Q80V85 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Gm18669-201ENSMUST00000216049 778 ntBASIC16.85■□□□□ 0.29
Trim62Q80V85 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim62Q80V85 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim62Q80V85 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms