Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3cQ80U95 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3cQ80U95 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3cQ80U95 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Gm12497-201ENSMUST00000138778 237 ntBASIC19.2■□□□□ 0.66
Ube3cQ80U95 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Gm18733-201ENSMUST00000173950 856 ntBASIC19.2■□□□□ 0.66
Ube3cQ80U95 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.2■□□□□ 0.66
Ube3cQ80U95 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.2■□□□□ 0.66
Ube3cQ80U95 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube3cQ80U95 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Gm4535-201ENSMUST00000182274 558 ntBASIC19.19■□□□□ 0.66
Ube3cQ80U95 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Gm2651-201ENSMUST00000203560 838 ntBASIC19.19■□□□□ 0.66
Ube3cQ80U95 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Gm9172-201ENSMUST00000212092 954 ntBASIC19.19■□□□□ 0.66
Ube3cQ80U95 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Gm10355-201ENSMUST00000097146 517 ntBASIC19.19■□□□□ 0.66
Ube3cQ80U95 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ube3cQ80U95 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.18■□□□□ 0.66
Ube3cQ80U95 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Gm25990-201ENSMUST00000102440 86 ntBASIC19.18■□□□□ 0.66
Ube3cQ80U95 Gm8097-201ENSMUST00000117903 829 ntBASIC19.18■□□□□ 0.66
Ube3cQ80U95 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.18■□□□□ 0.66
Ube3cQ80U95 Gm10060-201ENSMUST00000212002 111 ntBASIC19.18■□□□□ 0.66
Ube3cQ80U95 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Ube3cQ80U95 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ube3cQ80U95 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Gm11780-201ENSMUST00000136880 516 ntBASIC19.17■□□□□ 0.66
Ube3cQ80U95 Mir5131-201ENSMUST00000175426 93 ntBASIC19.17■□□□□ 0.66
Ube3cQ80U95 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.17■□□□□ 0.66
Ube3cQ80U95 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.17■□□□□ 0.66
Ube3cQ80U95 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ube3cQ80U95 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms