Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Gm15165-201ENSMUST00000118140 502 ntBASIC17.82■□□□□ 0.44
Ush1gQ80T11 Gm7862-201ENSMUST00000121461 292 ntBASIC17.82■□□□□ 0.44
Ush1gQ80T11 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.82■□□□□ 0.44
Ush1gQ80T11 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.82■□□□□ 0.44
Ush1gQ80T11 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ush1gQ80T11 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ush1gQ80T11 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.81■□□□□ 0.44
Ush1gQ80T11 Gm1401-201ENSMUST00000122048 772 ntBASIC17.81■□□□□ 0.44
Ush1gQ80T11 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Gm44454-201ENSMUST00000198541 138 ntBASIC17.81■□□□□ 0.44
Ush1gQ80T11 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.81■□□□□ 0.44
Ush1gQ80T11 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ush1gQ80T11 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Ush1gQ80T11 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.8■□□□□ 0.44
Ush1gQ80T11 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ush1gQ80T11 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1gQ80T11 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.79■□□□□ 0.44
Ush1gQ80T11 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Gm6296-201ENSMUST00000222599 943 ntBASIC17.79■□□□□ 0.44
Ush1gQ80T11 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ush1gQ80T11 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms