Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Gm37292-201ENSMUST00000192062 758 ntBASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfx4Q7TNK1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Gm11249-201ENSMUST00000117071 859 ntBASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Prob1-201ENSMUST00000097619 3021 ntBASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx4Q7TNK1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx4Q7TNK1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Rfx4Q7TNK1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Rfx4Q7TNK1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Gm9731-201ENSMUST00000209480 747 ntBASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx4Q7TNK1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms