Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Sned1Q70E20 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.65■□□□□ 0.74
Sned1Q70E20 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.65■□□□□ 0.74
Sned1Q70E20 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.65■□□□□ 0.74
Sned1Q70E20 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sned1Q70E20 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sned1Q70E20 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sned1Q70E20 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Gm22175-201ENSMUST00000175007 78 ntBASIC19.64■□□□□ 0.73
Sned1Q70E20 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Gm27622-201ENSMUST00000183779 60 ntBASIC19.64■□□□□ 0.73
Sned1Q70E20 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.64■□□□□ 0.73
Sned1Q70E20 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sned1Q70E20 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sned1Q70E20 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.64■□□□□ 0.73
Sned1Q70E20 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sned1Q70E20 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.63■□□□□ 0.73
Sned1Q70E20 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sned1Q70E20 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sned1Q70E20 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sned1Q70E20 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sned1Q70E20 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.62■□□□□ 0.73
Sned1Q70E20 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sned1Q70E20 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.62■□□□□ 0.73
Sned1Q70E20 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.62■□□□□ 0.73
Sned1Q70E20 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sned1Q70E20 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sned1Q70E20 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Sned1Q70E20 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.61■□□□□ 0.73
Sned1Q70E20 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Mir449b-201ENSMUST00000104833 80 ntBASIC19.61■□□□□ 0.73
Sned1Q70E20 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.61■□□□□ 0.73
Sned1Q70E20 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.61■□□□□ 0.73
Sned1Q70E20 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sned1Q70E20 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.61■□□□□ 0.73
Sned1Q70E20 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sned1Q70E20 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Sned1Q70E20 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sned1Q70E20 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sned1Q70E20 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Rprl2-201ENSMUST00000157150 290 ntBASIC19.6■□□□□ 0.73
Sned1Q70E20 Thap2-203ENSMUST00000218989 527 ntBASIC19.6■□□□□ 0.73
Sned1Q70E20 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sned1Q70E20 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sned1Q70E20 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms