Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx55Q6ZPL9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx55Q6ZPL9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx55Q6ZPL9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx55Q6ZPL9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx55Q6ZPL9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx55Q6ZPL9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx55Q6ZPL9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx55Q6ZPL9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx55Q6ZPL9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx55Q6ZPL9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm8825-201ENSMUST00000182565 998 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm4518-201ENSMUST00000182638 718 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms