Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Casc1Q6TDU8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Gm7977-201ENSMUST00000193787 748 ntBASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Gm7370-201ENSMUST00000219471 767 ntBASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc1Q6TDU8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc1Q6TDU8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Casc1Q6TDU8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Gm13474-201ENSMUST00000122466 815 ntBASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casc1Q6TDU8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms