Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Gm27867-201ENSMUST00000184778 125 ntBASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Gm18206-201ENSMUST00000207027 926 ntBASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Rps4l-201ENSMUST00000071745 943 ntBASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Gm2651-201ENSMUST00000203560 838 ntBASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Gm6296-201ENSMUST00000222599 943 ntBASIC19.5■□□□□ 0.71
Npc1l1Q6T3U4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Gm25925-201ENSMUST00000158314 306 ntBASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.49■□□□□ 0.71
Npc1l1Q6T3U4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npc1l1Q6T3U4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44357-201ENSMUST00000195897 142 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm19658-201ENSMUST00000196231 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44367-201ENSMUST00000196836 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44350-201ENSMUST00000197197 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44390-201ENSMUST00000197533 144 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44313-201ENSMUST00000198018 138 ntBASIC19.47■□□□□ 0.71
Npc1l1Q6T3U4 Gm44486-201ENSMUST00000198508 138 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms