Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Gm11745-201ENSMUST00000121669 448 ntBASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Gm17271-201ENSMUST00000165535 355 ntBASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Gm18489-201ENSMUST00000172565 551 ntBASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn10aQ6QIY3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Scn10aQ6QIY3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Scn10aQ6QIY3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Gm7787-201ENSMUST00000216858 688 ntBASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn10aQ6QIY3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 AA543401-201ENSMUST00000164248 1269 ntBASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Gm43125-201ENSMUST00000201724 730 ntBASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn10aQ6QIY3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn10aQ6QIY3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn10aQ6QIY3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms