Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Gm37935-201ENSMUST00000192012 982 ntBASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nup98Q6PFD9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup98Q6PFD9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup98Q6PFD9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup98Q6PFD9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Gm8000-201ENSMUST00000188378 592 ntBASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Gm15467-201ENSMUST00000120582 445 ntBASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nup98Q6PFD9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.13■□□□□ 0.65
Nup98Q6PFD9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nup98Q6PFD9 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nup98Q6PFD9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms