Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Gm29518-201ENSMUST00000190858 372 ntBASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Gm29707-201ENSMUST00000196325 491 ntBASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcc2Q6PDG5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc2Q6PDG5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Mir770-201ENSMUST00000103252 94 ntBASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Gm17808-201ENSMUST00000200859 894 ntBASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc2Q6PDG5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Gm14859-201ENSMUST00000117752 357 ntBASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Gm6623-201ENSMUST00000173570 544 ntBASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms