Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smarcd3Q6P9Z1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd3Q6P9Z1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcd3Q6P9Z1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Odf3b-204ENSMUST00000227834 930 ntBASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcd3Q6P9Z1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.98□□□□□ -0.01
Smarcd3Q6P9Z1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd3Q6P9Z1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms