Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Krt42Q6IFX2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Krt42Q6IFX2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Krt42Q6IFX2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Krt42Q6IFX2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Gm37025-201ENSMUST00000195159 829 ntBASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Krt42Q6IFX2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms