Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Gm11539-201ENSMUST00000119837 557 ntBASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Gm5417-201ENSMUST00000079706 384 ntBASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga7Q6DD96 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga7Q6DD96 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga7Q6DD96 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdhga7Q6DD96 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga7Q6DD96 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga7Q6DD96 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga7Q6DD96 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga7Q6DD96 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga7Q6DD96 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga7Q6DD96 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms