Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Six1Q62231 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Gm13474-201ENSMUST00000122466 815 ntBASIC16.76■□□□□ 0.27
Six1Q62231 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Gm37055-201ENSMUST00000191866 133 ntBASIC16.76■□□□□ 0.27
Six1Q62231 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.76■□□□□ 0.27
Six1Q62231 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Six1Q62231 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six1Q62231 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 App-207ENSMUST00000227737 2827 ntBASIC16.75■□□□□ 0.27
Six1Q62231 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Six1Q62231 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Six1Q62231 Gm13559-201ENSMUST00000120476 863 ntBASIC16.75■□□□□ 0.27
Six1Q62231 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.75■□□□□ 0.27
Six1Q62231 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six1Q62231 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.74■□□□□ 0.27
Six1Q62231 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Six1Q62231 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.74■□□□□ 0.27
Six1Q62231 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six1Q62231 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Six1Q62231 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.73■□□□□ 0.27
Six1Q62231 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Six1Q62231 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.73■□□□□ 0.27
Six1Q62231 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Six1Q62231 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Six1Q62231 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Six1Q62231 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Six1Q62231 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Six1Q62231 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six1Q62231 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Six1Q62231 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Six1Q62231 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.72■□□□□ 0.27
Six1Q62231 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Six1Q62231 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Mir1668-201ENSMUST00000184114 107 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms