Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mir449b-201ENSMUST00000104833 80 ntBASIC15.27■□□□□ 0.04
VcanQ62059 Gm29707-201ENSMUST00000196325 491 ntBASIC15.27■□□□□ 0.04
VcanQ62059 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.27■□□□□ 0.04
VcanQ62059 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VcanQ62059 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.27■□□□□ 0.03
VcanQ62059 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VcanQ62059 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
VcanQ62059 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
VcanQ62059 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VcanQ62059 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
VcanQ62059 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VcanQ62059 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
VcanQ62059 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.27■□□□□ 0.03
VcanQ62059 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.26■□□□□ 0.03
VcanQ62059 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
VcanQ62059 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.26■□□□□ 0.03
VcanQ62059 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.26■□□□□ 0.03
VcanQ62059 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VcanQ62059 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.26■□□□□ 0.03
VcanQ62059 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Gm27306-201ENSMUST00000183970 107 ntBASIC15.26■□□□□ 0.03
VcanQ62059 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.26■□□□□ 0.03
VcanQ62059 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.26■□□□□ 0.03
VcanQ62059 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VcanQ62059 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.25■□□□□ 0.03
VcanQ62059 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.25■□□□□ 0.03
VcanQ62059 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VcanQ62059 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VcanQ62059 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Gm18889-201ENSMUST00000174284 929 ntBASIC15.24■□□□□ 0.03
VcanQ62059 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.24■□□□□ 0.03
VcanQ62059 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.24■□□□□ 0.03
VcanQ62059 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
VcanQ62059 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.24■□□□□ 0.03
VcanQ62059 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.24■□□□□ 0.03
VcanQ62059 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VcanQ62059 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.23■□□□□ 0.03
VcanQ62059 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VcanQ62059 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
VcanQ62059 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.23■□□□□ 0.03
VcanQ62059 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VcanQ62059 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.23■□□□□ 0.03
VcanQ62059 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VcanQ62059 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VcanQ62059 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VcanQ62059 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
VcanQ62059 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.22■□□□□ 0.03
VcanQ62059 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.22■□□□□ 0.03
VcanQ62059 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
VcanQ62059 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.22■□□□□ 0.03
VcanQ62059 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.22■□□□□ 0.03
VcanQ62059 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.22■□□□□ 0.03
VcanQ62059 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.22■□□□□ 0.03
VcanQ62059 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VcanQ62059 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms