Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ctr9Q62018 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ctr9Q62018 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctr9Q62018 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.19■□□□□ 0.66
Ctr9Q62018 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctr9Q62018 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ctr9Q62018 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.19■□□□□ 0.66
Ctr9Q62018 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.19■□□□□ 0.66
Ctr9Q62018 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Rprl3-201ENSMUST00000157400 290 ntBASIC19.19■□□□□ 0.66
Ctr9Q62018 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctr9Q62018 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.18■□□□□ 0.66
Ctr9Q62018 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.18■□□□□ 0.66
Ctr9Q62018 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.18■□□□□ 0.66
Ctr9Q62018 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctr9Q62018 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctr9Q62018 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctr9Q62018 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Ctr9Q62018 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ctr9Q62018 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.17■□□□□ 0.66
Ctr9Q62018 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.17■□□□□ 0.66
Ctr9Q62018 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctr9Q62018 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.16■□□□□ 0.66
Ctr9Q62018 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.16■□□□□ 0.66
Ctr9Q62018 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctr9Q62018 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.16■□□□□ 0.66
Ctr9Q62018 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.16■□□□□ 0.66
Ctr9Q62018 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ctr9Q62018 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms