Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.66■□□□□ 0.1
Rai1Q61818 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rai1Q61818 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.66■□□□□ 0.1
Rai1Q61818 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.66■□□□□ 0.1
Rai1Q61818 Chchd1-203ENSMUST00000224633 557 ntBASIC15.66■□□□□ 0.1
Rai1Q61818 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rai1Q61818 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rai1Q61818 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Rai1Q61818 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Rai1Q61818 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.65■□□□□ 0.1
Rai1Q61818 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.65■□□□□ 0.1
Rai1Q61818 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rai1Q61818 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.65■□□□□ 0.1
Rai1Q61818 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.65■□□□□ 0.1
Rai1Q61818 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.65■□□□□ 0.1
Rai1Q61818 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.65■□□□□ 0.1
Rai1Q61818 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.65■□□□□ 0.1
Rai1Q61818 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rai1Q61818 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rai1Q61818 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Rai1Q61818 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rai1Q61818 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.64■□□□□ 0.09
Rai1Q61818 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.64■□□□□ 0.09
Rai1Q61818 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.64■□□□□ 0.09
Rai1Q61818 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.64■□□□□ 0.09
Rai1Q61818 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.64■□□□□ 0.09
Rai1Q61818 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.64■□□□□ 0.09
Rai1Q61818 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.64■□□□□ 0.09
Rai1Q61818 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.64■□□□□ 0.09
Rai1Q61818 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rai1Q61818 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rai1Q61818 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rai1Q61818 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.63■□□□□ 0.09
Rai1Q61818 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.63■□□□□ 0.09
Rai1Q61818 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rai1Q61818 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Rai1Q61818 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Rai1Q61818 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Rai1Q61818 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Rai1Q61818 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rai1Q61818 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Auts2-212ENSMUST00000178555 309 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm8825-201ENSMUST00000182565 998 ntBASIC15.63■□□□□ 0.09
Rai1Q61818 Gm4518-201ENSMUST00000182638 718 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms