Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim25Q61510 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim25Q61510 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim25Q61510 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim25Q61510 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim25Q61510 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.77■□□□□ 0.43
Trim25Q61510 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.77■□□□□ 0.43
Trim25Q61510 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim25Q61510 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim25Q61510 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim25Q61510 Rab3c-203ENSMUST00000224180 967 ntBASIC17.76■□□□□ 0.43
Trim25Q61510 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim25Q61510 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim25Q61510 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim25Q61510 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Trim25Q61510 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim25Q61510 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim25Q61510 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.75■□□□□ 0.43
Trim25Q61510 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.75■□□□□ 0.43
Trim25Q61510 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Trim25Q61510 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Trim25Q61510 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim25Q61510 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Trim25Q61510 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trim25Q61510 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim25Q61510 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim25Q61510 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim25Q61510 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim25Q61510 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim25Q61510 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim25Q61510 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim25Q61510 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim25Q61510 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim25Q61510 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trim25Q61510 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim25Q61510 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim25Q61510 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim25Q61510 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim25Q61510 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trim25Q61510 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim25Q61510 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim25Q61510 Gm4974-201ENSMUST00000209974 875 ntBASIC17.72■□□□□ 0.43
Trim25Q61510 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.72■□□□□ 0.43
Trim25Q61510 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim25Q61510 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms